M.D., University of Colorado School of Medicine 2007
Ph.D., University of Colorado at Boulder 2005
Legione, AR, Amery-Gale, J, Lynch, M, Haynes, L, Gilkerson, JR, Sansom, FM, and Devlin, JM. "Variation in the microbiome of the urogenital tract of Chlamydia-free female koalas (Phascolarctos cinereus) with and without 'wet bottom'." PLoS ONE 13.3 (March 1, 2018). Full Text
Taylor, S, Lynch, M, Terkildsen, M, Stevenson, G, Yates, A, Piro, N, de Araujo, J, and Gray, R. "Utility of fur as a biomarker for persistent organic pollutants in Australian fur seals (Arctocephalus pusillus doriferus)." The Science of the total environment 610-611 (January 2018): 1310-1320. Full Text
Heil, JR, Lynch, MDJ, Cheng, J, Matysiakiewicz, O, D'Alessio, M, and Charles, TC. "The Completed PacBio Single-Molecule Real-Time Sequence of Methylosinus trichosporium Strain OB3b Reveals the Presence of a Third Large Plasmid." Genome announcements 5.49 (December 7, 2017). Full Text
Moreb, EA, Hoover, B, Yaseen, A, Valyasevi, N, Roecker, Z, Menacho-Melgar, R, and Lynch, MD. "Managing the SOS Response for Enhanced CRISPR-Cas-Based Recombineering in E. coli through Transient Inhibition of Host RecA Activity." ACS synthetic biology 6.12 (December 2017): 2209-2218. Full Text
Lynch, M, McGrath, K, Raj, K, McLaren, P, Payne, K, McCoy, R, and Giger, U. "HEREDITARY FACTOR VII DEFICIENCY IN THE ASIAN ELEPHANT (ELEPHAS MAXIMUS) CAUSED BY A F7 MISSENSE MUTATION." Journal of wildlife diseases 53.2 (April 2017): 248-257. Full Text
Legione, AR, Patterson, JLS, Whiteley, P, Firestone, SM, Curnick, M, Bodley, K, Lynch, M, Gilkerson, JR, Sansom, FM, and Devlin, JM. "Koala retrovirus genotyping analyses reveal a low prevalence of KoRV-A in Victorian koalas and an association with clinical disease." Journal of medical microbiology 66.2 (February 2017): 236-244. Full Text
Burg, JM, Cooper, CB, Ye, Z, Reed, BR, Moreb, EA, and Lynch, MD. "Large-scale bioprocess competitiveness: the potential of dynamic metabolic control in two-stage fermentations." Current Opinion in Chemical Engineering 14 (November 2016): 121-136. Full Text
Legione, AR, Patterson, JLS, Whiteley, PL, Amery-Gale, J, Lynch, M, Haynes, L, Gilkerson, JR, Polkinghorne, A, Devlin, JM, and Sansom, FM. "Identification of unusual Chlamydia pecorum genotypes in Victorian koalas (Phascolarctos cinereus) and clinical variables associated with infection." Journal of medical microbiology 65.5 (May 2016): 420-428. Full Text
Lynch, MD. "Into new territory: improved microbial synthesis through engineering of the essential metabolic network." Current opinion in biotechnology 38 (April 2016): 106-111. (Review) Full Text
Legione, AR, Amery-Gale, J, Lynch, M, Haynes, L, Gilkerson, JR, Sansom, FM, and Devlin, JM. "Chlamydia pecorum Infection in Free-ranging Koalas ( Phascolarctos cinereus ) on French Island, Victoria, Australia." Journal of wildlife diseases 52.2 (April 2016): 426-429. Full Text
Lipscomb, TW, Lipscomb, ML, Gill, RT, and Lynch, MD. "Metabolic Engineering of Recombinant E. coli for the Production of 3-Hydroxypropionate." Engineering Complex Phenotypes in Industrial Strains. October 24, 2012. 185-120. Full Text
Kennedy, P, Duffy, N, Horgan, S, and Lynch, M. "Chemical Process Safety Education: Joint Industry-Academic venture." January 1, 2015.
Lynch, MD. "A rational microbial design perspective in the design build test era." January 1, 2014.
Watson, FD, Mercogliano, CP, Ribble, WK, Anderson, RD, Liao, HH, Lipscomb, TW, and Lynch, MD. "Enzyme engineering of malonyl coA reductase (MCR) to improve 3-hydroxypropionate (3HP) production." March 25, 2012.
Lipscomb, ML, Lipscomb, TW, Liao, H, Maness, P, and Lynch, MD. "Production of fungible diesel via fatty acid synthesis from hydrogen and carbon dioxide feedstocks." March 25, 2012.
Lynch, MD, Manness, PC, Lipscomb, M, Warnecke, T, and Liao, H. "Novel biological conversion of hydrogen and carbon dioxide directly into biodiesel." December 1, 2011.
Lipscomb, ML, Warnecke, T, Hans, L, Maness, LP, and Lynch, MD. "Novel biological conversion of hydrogen and carbon dioxide directly into biodiesel." August 25, 2011.
Mercogliano, CP, Liao, HH, and Lynch, MD. "Enzyme evolution of an alpha-keto decarboxylase." March 27, 2011.
Lynch, MD, Warnecke, T, Singh, A, and Gill, RT. "Genomics tools for elucidating the function of trait conferring genes." December 1, 2005.
Warnecke, T, Lynch, MD, and Gill, RT. "Identification of organic acid tolerance genes in E. coli for biorefinery applications." December 1, 2005.
Warnecke, TE, Lynch, MD, and Gill, RT. "Post-genomics approach to understanding E. Coli network architecture." March 13, 2005.